Package: hmer 1.6.0
Andrew Iskauskas
hmer: History Matching and Emulation Package
A set of objects and functions for Bayes Linear emulation and history matching. Core functionality includes automated training of emulators to data, diagnostic functions to ensure suitability, and a variety of proposal methods for generating 'waves' of points. For details on the mathematical background, there are many papers available on the topic (see references attached to function help files or the below references); for details of the functions in this package, consult the manual or help files. Iskauskas, A, et al. (2024) <doi:10.18637/jss.v109.i10>. Bower, R.G., Goldstein, M., and Vernon, I. (2010) <doi:10.1214/10-BA524>. Craig, P.S., Goldstein, M., Seheult, A.H., and Smith, J.A. (1997) <doi:10.1007/978-1-4612-2290-3_2>.
Authors:
hmer_1.6.0.tar.gz
hmer_1.6.0.zip(r-4.5)hmer_1.6.0.zip(r-4.4)hmer_1.6.0.zip(r-4.3)
hmer_1.6.0.tgz(r-4.4-any)hmer_1.6.0.tgz(r-4.3-any)
hmer_1.6.0.tar.gz(r-4.5-noble)hmer_1.6.0.tar.gz(r-4.4-noble)
hmer_1.6.0.tgz(r-4.4-emscripten)hmer_1.6.0.tgz(r-4.3-emscripten)
hmer.pdf |hmer.html✨
hmer/json (API)
NEWS
| # Install 'hmer' in R: |
| install.packages('hmer', repos = c('https://andy-iskauskas.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/andy-iskauskas/hmer/issues
- BirthDeath - Birth-Death Model Results
- SIREmulators - Sample Emulators
- SIRImplausibility - Sample Implausibility Data
- SIRMultiWaveData - Sample Multi-wave Results
- SIRMultiWaveEmulators - Sample Multi-wave Emulators
- SIRSample - Sample SIR data
- SIR_stochastic - Stochastic SIR Data
- problem_data - Data for an interesting emulation problem
Last updated 1 months agofrom:0fca964b25. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 20 2024 |
| R-4.5-win | OK | Nov 20 2024 |
| R-4.5-linux | OK | Nov 20 2024 |
| R-4.4-win | OK | Nov 20 2024 |
| R-4.4-mac | OK | Nov 20 2024 |
| R-4.3-win | OK | Nov 20 2024 |
| R-4.3-mac | OK | Nov 20 2024 |
Exports:analyze_diagnosticbehaviour_plotbimodal_emulator_from_dataclassification_diagcollect_emulatorscomparison_diagCorrelatordiagnostic_passdiagnostic_wrapdirectional_derivdirectional_proposaleffect_strengthEmulatoremulator_from_dataemulator_plotexp_sqexport_emulator_to_jsonfull_wavegamma_expgenerate_new_designgenerate_new_runsget_diagnosticHierarchicalEmulatorhit_by_waveidemcimport_emulator_from_jsonindividual_errorsmaternmaximin_samplenth_implausibleorn_uhloutput_plotplot_activesplot_latticeplot_wrapProto_emulatorrat_quadresidual_diagsimulator_plotspace_removalspace_removedstandard_errorssubset_emulatorssummary_diagvalidation_diagnosticsvalidation_pairsvariance_emulator_from_datawave_dependencieswave_pointswave_values
Dependencies:beeswarmcliclustercolorspacecpp11crayondplyrfansifarverforcatsgenericsGGallyggbeeswarmggplot2ggstatsgluegridExtragtablehmsisobandjsonlitelabelinglatticelhslifecyclemagrittrMASSMatrixmgcvmunsellmvtnormnlmepatchworkpdistpillarpkgconfigplyrprettyunitsprogresspurrrR6RColorBrewerRcpprlangscalesstringistringrtibbletidyrtidyselectutf8vctrsviporviridisviridisLitewithr
Demonstrating the hmer Package
Rendered fromdemonstrating-the-hmer-package.Rmdusingknitr::rmarkdownon Nov 20 2024.Last update: 2023-12-14
Started: 2021-08-05
Emulation and History Matching Handbook
Rendered fromemulationhandbook.Rmdusingknitr::rmarkdownon Nov 20 2024.Last update: 2023-12-14
Started: 2022-03-28
Low Dimensional Examples
Rendered fromlow-dimensional-examples.Rmdusingknitr::rmarkdownon Nov 20 2024.Last update: 2024-05-14
Started: 2021-05-14
Stochastic Emulation
Rendered fromstochasticandbimodalemulation.Rmdusingknitr::rmarkdownon Nov 20 2024.Last update: 2024-05-15
Started: 2022-02-16
